• eAtlas Data Catalogue
  •   Search
  •   Map
  •  Sign in

Annual and seasonal bPAR index values for each NRM Region and Waterbody as reported in (NESP TWQ 5.3, AIMS and JCU)

This dataset contains annual and seasonal values of the benthic light (bPAR index) for water quality on the Great Barrier Reef as calculated for each NRM Region (Cape York, Wet Tropics, Dry Tropics, Fitzroy and Mary-Burnett) and waterbody (Closed Coastal, Open Coastal, Midshelf and Offshore) for each water year between 2003 and 2019, as reported in NESP TWQ Project 5.3. Code used to produce these values is also available through eAtlas, as is the daily bPAR data.



The amount of light available for photosynthesis (photosynthetically active radiation, or PAR) is an important determinant of ecosystem health. PAR reaching the bottom of the water column is known as benthic PAR (bPAR). Where there is sufficient light reaching the bottom, seagrasses and corals may thrive. bPAR varies seasonally as a function of surface PAR, but also varies function of both water depth and water quality.



This dataset contains the annual and seasonal values of the bPAR index developed through NESP TWQ Project 5.3.



Methods:

Daily benthic photosynthetically active radiation (bPAR) derived from remote sensing ocean colour observations is used to derive an index for water quality in the Great Barrier Reef (GBR). Daily bPAR observations at a nominal 1km2 resolution are used to calculate a cumulative seasonal and annual light stress experienced by benthic photosynthesising organisms at each pixel. This light stress is aggregated over each NRM region and waterbody of the GBR and scaled to produce an index with a value between 0 (no light penetration to benthic habitats) and 1 (excellent light penetration to benthic habitats).



Boundaries of NRM Regions and water bodies as used here are available as part of the “code” dataset also associated with NESP TWQ Project 5.3 in eAtlas. Spatial information (geographic outlines of GBR NRM regions and waterbodies) is provided as a SpatialPolygons variable “Polys” in the R data file Polys.rda



The full method used to calculate the index is described in the manuscript:

Canto, M. M., Fabricius, K. E., Logan, M., Lewis, S., McKinna, L. I. W., & Robson, B. J. (2021). A benthic light index of water quality in the Great Barrier Reef, Australia. Marine Pollution Bulletin, 169, 112539. https://doi.org/10.1016/j.marpolbul.2021.112539



Format:

This dataset consists of a comma separated variable (CSV) file containing the annual and seasonal values of the bPAR index for each water year from 2003 through 2019. Columns contain:

A) Water Year. Each water year is defined as the period from 1 October in the preceding calendar year through to 30 September of the year in question, so for example the 2003 water year runs from 1 October 2002 through to 30 September 2003, inclusive.

B) NRM Region. Name of NRM management region (Cape York, Wet Tropics, Dry Tropics, Fitzroy or Burnett-Mary).

C) Water Body. Name of water body (Closed Coastal, Open Coastal, Midshelf, or Offshore).

D) Annual bPAR index. Value of the bPAR index calculated over a full water year for the NRM region and waterbody in question. Values range between 0 (very poor light penetration to benthic habitats) to 1 (excellent light penetration to benthic habitats).

E) Wet season bPAR index. Value of the bPAR index calculated over the wet season of the water year in question (i.e. 1 October of the preceding calendar year to 30 April).

F) Dry season bPAR index. Value of the bPAR index calculated over the dry season of the water year in question (i.e. 1 May to 30 September).



References:

Canto, M. M., Fabricius, K. E., Logan, M., Lewis, S., McKinna, L. I. W., & Robson, B. J. (2021). A benthic light index of water quality in the Great Barrier Reef, Australia. Marine Pollution Bulletin, 169, 112539. https://doi.org/10.1016/j.marpolbul.2021.112539



Data Location:



This dataset is filed in the eAtlas enduring data repository at: data\nesp5\5.3_Benthic-light

Simple

Identification info

Date (Creation)
2020-11-14
Date (Publication)
2020-11-24T00:00:00
Cited responsible party
Role Organisation Name Telephone Delivery point City Administrative area Postal code Country Electronic mail address
Principal investigator Australian Institute of Marine Science (AIMS) Robson, Barbara, Dr Voice Facsimile PRIVATE MAIL BAG 3, TOWNSVILLE MAIL CENTRE Townsville Queensland 4810 Australia b.robson@aims.gov.au
Collaborator James Cook University and AIMS@JCU Magno-Canto, Marites, Ms Voice Facsimile James Cook University Townsville Queensland Queensland Australia marites.canto@my.jcu.edu.au
Collaborator Go2Q Pty. Ltd. McKinna, Lachlan, Dr Voice Facsimile PO Box 61 Buderim Queensland 4556 Australia lachlan.mckinna@go2q.com.au
Collaborator Australian Institute of Marine Science (AIMS) Logan, Murray, Dr Voice Facsimile PRIVATE MAIL BAG 3, TOWNSVILLE MAIL CENTRE Townsville Queensland 4810 Australia M.Logan@aims.gov.au
Collaborator Australian Institute of Marine Science (AIMS) Fabricius, Katharina, Dr Voice Facsimile PRIVATE MAIL BAG 3, TOWNSVILLE MAIL CENTRE Townsville Queensland Townsville Australia k.fabricius@aims.gov.au
Collaborator James Cook University Collier, Catherine, Dr Voice Facsimile catherine.collier@jcu.edu.au
Point of contact
Role Organisation Name Telephone Delivery point City Administrative area Postal code Country Electronic mail address
Point of contact Australian Institute of Marine Science (AIMS) Robson, Barbara, Dr Voice Facsimile PRIVATE MAIL BAG 3, TOWNSVILLE MAIL CENTRE Townsville Queensland 4810 Australia
Topic category
  • Biota

Extent

Extent

Description
Great Barrier Reef, Australia




Temporal extent

Time period
2002-10-01 2019-09-30

Resource constraints

Linkage
http://i.creativecommons.org/l/by/3.0/au/88x31.png

License Graphic

Title
Creative Commons Attribution 3.0 Australia License
Cited responsible party
Role Organisation Name Telephone Delivery point City Administrative area Postal code Country Electronic mail address
Website
http://creativecommons.org/licenses/by/3.0/au/

License Text

Language
English
Character encoding
UTF8

Distribution Information

OnLine resource
NESP TWQ project page

OnLine resource
eAtlas Web Mapping Service (WMS) (AIMS)

OnLine resource
Project web site

OnLine resource
Shapefile + CSV + Metadata [Zip 15.2 MB]

OnLine resource
Interactive map of this dataset

OnLine resource
nesp5:GBR_AIMS_JCU_NESP-TWQ-5-3_MODIS-benthic-light_2003-2019_Annual

OnLine resource
nesp5:GBR_AIMS_JCU_NESP-TWQ-5-3_MODIS-benthic-light_2003-2019_Dry-season

OnLine resource
nesp5:GBR_AIMS_JCU_NESP-TWQ-5-3_MODIS-benthic-light_2003-2019_Wet-season

Metadata constraints

Linkage
http://i.creativecommons.org/l/by/3.0/au/88x31.png

License Graphic

Title
Creative Commons Attribution 3.0 Australia License
Cited responsible party
Role Organisation Name Telephone Delivery point City Administrative area Postal code Country Electronic mail address
Website
http://creativecommons.org/licenses/by/3.0/au/

License Text

Metadata

Metadata identifier
urn:uuid/fff3101a-0e28-4f51-931b-f995d214eb67

Language
English
Character encoding
UTF8
Contact
Role Organisation Name Telephone Delivery point City Administrative area Postal code Country Electronic mail address
Point of contact Australian Institute of Marine Science (AIMS) eAtlas Data Manager Voice Facsimile PRIVATE MAIL BAG 3, TOWNSVILLE MAIL CENTRE Townsville Queensland 4810 Australia e-atlas@aims.gov.au
Parent metadata
  • NESP TWQ Project 5.3 - Benthic light as ecologically-validated GBR-wide indicator for water quality: Drivers, thresholds and cumulative risks, 2019-2020 (AIMS)

Type of resource

Resource scope
Dataset
Metadata linkage
https://eatlas.org.au/data/uuid/fff3101a-0e28-4f51-931b-f995d214eb67

Point of truth URL of this metadata record

Date info (Creation)
2021-07-21T03:28:54
Date info (Revision)
2026-02-18T03:02:03.164Z

Metadata standard

Title
ISO 19115-3:2018
 
 

Overviews

large_thumbnail

Spatial extent

Keywords



Provided by

Access to the catalogue
Read here the full details and access to the data.




  •   About
  •   Github
  •